To Slice Phylogenetic Trees and Infer Evolutionary Patterns Over Time
Calculates the range weighted rate of accumulation of phylogenetic B-d...
Collapse the tips of a phylogenetic tree based on a temporal threshold
Calculates the relative value of a phylogenetic index in a temporal se...
Objects exported from other packages
Slices a temporal interval within a phylogenetic tree
Slices a phylogenetic tree following a 'rootward' orientation
Slices a phylogenetic tree following a 'tipward' orientation
Calculates the rate of accumulation of phylogenetic B-diversity (CpB) ...
Calculates the rate of accumulation of phylogenetic diversity (CpD) ov...
Calculates the rate of accumulation of phylogenetic endemism (CpE) ove...
Make a line graph or a grid map of estimated rates of accumulation of ...
Make a plot of the sensitivity analysis evaluated under cumulative phy...
Runs a sensitivity analysis for rates of accumulation of a given phylo...
Calculate the tip diversification rates (DR) for a phylogenetic tree
Capture general branching information for an inputted phylogenetic tre...
Slices a phylogenetic tree into multiple temporal slices
Provide a range of functions with multiple criteria for cutting phylogenetic trees at any evolutionary depth. It enables users to cut trees in any orientation, such as rootwardly (from root to tips) and tipwardly (from tips to its root), or allows users to define a specific time interval of interest. It can also be used to create multiple tree pieces of equal temporal width. Moreover, it allows the assessment of novel temporal rates for various phylogenetic indexes, which can be quickly displayed graphically.
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