Comparative Shortest Path Forest Stand Segmentation from LiDAR Data
Add geometric features to a LAS object
Add all las_attributes from las@data to the header of a las element
Add voxel coordinates to a las file
helper function for csp_cost_segemntation
Comparative Shortest Path with cost weighting tree segmentation
Fast Eigenvalues decomposition for k nearest neighbors using a C++ fun...
helper function to unlist distances computed by dbscan::frNN
helper function to unlist IDs generated by dbscan::frNN
Farthest Distance Sampling (Farthest Point Sampling)
Find stem base position using a geometric feature filtering and cluste...
Find stem base position using a density raster approach
Function to perform a forest inventory based on a segmented las object...
Function to perform a forest inventory based on a segmented las object...
Makes one las-object from multiple las-objects
Point distance function
Point distance function
Function to plot the inventory results into a lidR 3d plot of the poin...
Returns the angle between the center of the circle and a point in degr...
Helper function to compute distances from a point to the circle
RANSAC circle fitting algorithm specially adapted for tree DBH estimat...
Suppress only the cat() output
helper function to voxelize a las element
Functionality for segmenting individual trees from a forest stand scanned with a close-range (e.g., terrestrial or mobile) laser scanner. The complete workflow from a raw point cloud to a complete tabular forest inventory is provided. The package contains several algorithms for detecting tree bases and a graph-based algorithm to attach all remaining points to these tree bases. It builds heavily on the 'lidR' package. A description of the segmentation algorithm can be found in Larysch et al. (2025) <doi:10.1007/s10342-025-01796-z>.
Useful links