Diagnostics for OMOP Common Data Model Drug Records
Store the given input in a remote database table. It will be stored ei...
Drug exposure records for ingredients of interest
Get drug exposure route types
Check drug exposure source types
Get drug exposure record types
Compute the difference in days between 2 variables in a database table...
Get the descendants for the given ingredients
View the results in the Shiny app
Write a result to a file on disk.
Write (ingredient) diagnostics results on disk in given output folder.
Write diagnostics results to a zip file on disk in given output folder...
Write (ingredient) diagnostics results on disk in given output folder.
Check missings in drug exposure records
Create a summary about the diagnostics results
Summarise drug exposure record durations
Summarise the quantity column of the drug_exposure table
Check time in between drug records per person and report the summary
Validate the "checks" parameter
Check is an ingredient
Check if given object is a boolean.
Check that the sample is bigger than the mincellcount
Check if given table exists in cdm.
Check the verbatim_end_date field
Check if Days_supply is the same as datediff(drug_exp_start_date,drug_...
Check the database type.
Get a summary of the daily drug dose
Check the drug sig field; this is the verbatim instruction for the dru...
Check ingredient is present in given table
dataPlotPanel
DrugExposureDiagnostics: Diagnostics for OMOP Common Data Model Drug R...
Execute given checks on Drug Exposure.
Execute given checks on Drug Exposure for a single ingredient.
Get all options that can be passed to the "checks" parameter
metaDataPanel
Mock Drug exposure tables for ingredients of interest
Obscure the small number of counts
Pipe operator
Print duration from start to now and print it as well as new status me...
Run benchmark for ExecuteSingleIngredient
DrugExposureDiagnostics ShinyApp
Module Decorator Class
Ingredient specific diagnostics for drug exposure records in the Observational Medical Outcomes Partnership (OMOP) common data model.
Useful links