Luminescence0.9.25 package

Comprehensive Luminescence Dating Data Analysis

analyse_Al2O3C_CrossTalk

Al2O3:C Reader Cross Talk Analysis

analyse_Al2O3C_ITC

Al2O3 Irradiation Time Correction Analysis

analyse_Al2O3C_Measurement

Al2O3:C Passive Dosimeter Measurement Analysis

analyse_baSAR

Bayesian models (baSAR) applied on luminescence data

analyse_FadingMeasurement

Analyse fading measurements and returns the fading rate per decade (g-...

analyse_IRSAR.RF

Analyse IRSAR RF measurements

analyse_pIRIRSequence

Analyse post-IR IRSL measurement sequences

analyse_portableOSL

Analyse portable CW-OSL measurements

analyse_SAR.CWOSL

Analyse SAR CW-OSL measurements

Analyse_SAR.OSLdata

Analyse SAR CW-OSL measurements.

analyse_SAR.TL

Analyse SAR TL measurements

apply_CosmicRayRemoval

Function to remove cosmic rays from an RLum.Data.Spectrum S4 class obj...

apply_EfficiencyCorrection

Function to apply spectral efficiency correction to RLum.Data.Spectrum...

as

as() - RLum-object coercion

bin_RLum.Data

Channel binning - method dispatcher

calc_AliquotSize

Estimate the amount of grains on an aliquot

calc_AverageDose

Calculate the Average Dose and the dose rate dispersion

calc_CentralDose

Apply the central age model (CAM) after Galbraith et al. (1999) to a g...

calc_CobbleDoseRate

Calculate dose rate of slices in a spherical cobble

calc_CommonDose

Apply the (un-)logged common age model after Galbraith et al. (1999) t...

calc_CosmicDoseRate

Calculate the cosmic dose rate

calc_FadingCorr

Fading Correction after Huntley & Lamothe (2001)

calc_FastRatio

Calculate the Fast Ratio for CW-OSL curves

calc_FiniteMixture

Apply the finite mixture model (FMM) after Galbraith (2005) to a given...

calc_FuchsLang2001

Apply the model after Fuchs & Lang (2001) to a given De distribution.

calc_gSGC_feldspar

Calculate Global Standardised Growth Curve (gSGC) for Feldspar MET-pIR...

calc_gSGC

Calculate De value based on the gSGC by Li et al., 2015

calc_HomogeneityTest

Apply a simple homogeneity test after Galbraith (2003)

calc_Huntley2006

Apply the Huntley (2006) model

calc_IEU

Apply the internal-external-uncertainty (IEU) model after Thomsen et a...

calc_Kars2008

Apply the Kars et al. (2008) model (deprecated)

calc_Lamothe2003

Apply fading correction after Lamothe et al., 2003

calc_MaxDose

Apply the maximum age model to a given De distribution

calc_MinDose

Apply the (un-)logged minimum age model (MAM) after Galbraith et al. (...

calc_OSLLxTxDecomposed

Calculate Lx/Tx ratio for decomposed CW-OSL signal components

calc_OSLLxTxRatio

Calculate Lx/Tx ratio for CW-OSL curves

calc_SourceDoseRate

Calculation of the source dose rate via the date of measurement

calc_Statistics

Function to calculate statistic measures

calc_ThermalLifetime

Calculates the Thermal Lifetime using the Arrhenius equation

calc_TLLxTxRatio

Calculate the Lx/Tx ratio for a given set of TL curves -beta version-

calc_WodaFuchs2008

Obtain the equivalent dose using the approach by Woda and Fuchs 2008

combine_De_Dr

Combine Dose Rate and Equivalent Dose Distribution

convert_Activity2Concentration

Convert Nuclide Activities to Abundance and Vice Versa

convert_BIN2CSV

Export Risoe BIN-file(s) to CSV-files

convert_Concentration2DoseRate

Dose-rate conversion function

convert_Daybreak2CSV

Export measurement data produced by a Daybreak luminescence reader to ...

convert_PSL2CSV

Export PSL-file(s) to CSV-files

convert_RLum2Risoe.BINfileData

Converts RLum.Analysis-objects and RLum.Data.Curve-objects to RLum2Ris...

convert_SG2MG

Converts Single-Grain Data to Multiple-Grain Data

convert_Wavelength2Energy

Emission Spectra Conversion from Wavelength to Energy Scales (Jacobian...

convert_XSYG2CSV

Export XSYG-file(s) to CSV-files

CW2pHMi

Transform a CW-OSL curve into a pHM-OSL curve via interpolation under ...

CW2pLM

Transform a CW-OSL curve into a pLM-OSL curve

CW2pLMi

Transform a CW-OSL curve into a pLM-OSL curve via interpolation under ...

CW2pPMi

Transform a CW-OSL curve into a pPM-OSL curve via interpolation under ...

extdata

Collection of External Data

extract_IrradiationTimes

Extract Irradiation Times from an XSYG-file

extract_ROI

Extract Pixel Values through Circular Region-of-Interests (ROI) from a...

fit_CWCurve

Nonlinear Least Squares Fit for CW-OSL curves -beta version-

fit_EmissionSpectra

Luminescence Emission Spectra Deconvolution

fit_LMCurve

Nonlinear Least Squares Fit for LM-OSL curves

fit_OSLLifeTimes

Fitting and Deconvolution of OSL Lifetime Components

fit_SurfaceExposure

Nonlinear Least Squares Fit for OSL surface exposure data

fit_ThermalQuenching

Fitting Thermal Quenching Data

get_Layout

Collection of layout definitions

get_Quote

Function to return essential quotes

get_rightAnswer

Function to get the right answer

get_Risoe.BINfileData

General accessor function for RLum S4 class objects

get_RLum

General accessors function for RLum S4 class objects

GitHub-API

GitHub API

import_Data

Import Luminescence Data into R

install_DevelopmentVersion

Attempts to install the development version of the 'Luminescence' pack...

length_RLum

General accessor function for RLum S4 class objects

Luminescence-package

Comprehensive Luminescence Dating Data Analysis

merge_Risoe.BINfileData

Merge Risoe.BINfileData objects or Risoe BIN-files

merge_RLum.Analysis

Merge function for RLum.Analysis S4 class objects

merge_RLum.Data.Curve

Merge function for RLum.Data.Curve S4 class objects

merge_RLum

General merge function for RLum S4 class objects

merge_RLum.Results

Merge function for RLum.Results S4-class objects

methods_RLum

methods_RLum

names_RLum

S4-names function for RLum S4 class objects

plot_AbanicoPlot

Function to create an Abanico Plot.

plot_DetPlot

Create De(t) plot

plot_DRCSummary

Create a Dose-Response Curve Summary Plot

plot_DRTResults

Visualise dose recovery test results

plot_FilterCombinations

Plot filter combinations along with the (optional) net transmission wi...

plot_GrowthCurve

Fit and plot a dose-response curve for luminescence data (Lx/Tx agains...

plot_Histogram

Plot a histogram with separate error plot

plot_KDE

Plot kernel density estimate with statistics

plot_NRt

Visualise natural/regenerated signal ratios

plot_OSLAgeSummary

Plot Posterior OSL-Age Summary

plot_RadialPlot

Function to create a Radial Plot

plot_Risoe.BINfileData

Plot single luminescence curves from a BIN file object

plot_RLum.Analysis

Plot function for an RLum.Analysis S4 class object

plot_RLum.Data.Curve

Plot function for an RLum.Data.Curve S4 class object

plot_RLum.Data.Image

Plot function for an RLum.Data.Image S4 class object

plot_RLum.Data.Spectrum

Plot function for an RLum.Data.Spectrum S4 class object

plot_RLum

General plot function for RLum S4 class objects

plot_RLum.Results

Plot function for an RLum.Results S4 class object

plot_ROI

Create Regions of Interest (ROI) Graphic

plot_ViolinPlot

Create a violin plot

PSL2Risoe.BINfileData

Convert portable OSL data to a Risoe.BINfileData object

read_BIN2R

Import Risø BIN/BINX-files into R

read_Daybreak2R

Import measurement data produced by a Daybreak TL/OSL reader into R

read_HeliosOSL2R

Import Luminescence Data from Helios Luminescence Reader

read_PSL2R

Import PSL files to R

read_RF2R

Import RF-files to R

read_SPE2R

Import Princeton Instruments (TM) SPE-file into R

read_TIFF2R

Import TIFF Image Data into R

read_XSYG2R

Import XSYG files to R

replicate_RLum

General replication function for RLum S4 class objects

report_RLum

Create a HTML-report for (RLum) objects

Risoe.BINfileData-class

Class "Risoe.BINfileData"

Risoe.BINfileData2RLum.Analysis

Convert Risoe.BINfileData object to an RLum.Analysis object

RLum-class

Class "RLum"

RLum.Analysis-class

Class "RLum.Analysis"

RLum.Data-class

Class "RLum.Data"

RLum.Data.Curve-class

Class "RLum.Data.Curve"

RLum.Data.Image-class

Class "RLum.Data.Image"

RLum.Data.Spectrum-class

Class "RLum.Data.Spectrum"

RLum.Results-class

Class "RLum.Results"

scale_GammaDose

Calculate the gamma dose deposited within a sample taking layer-to-lay...

Second2Gray

Converting equivalent dose values from seconds (s) to Gray (Gy)

set_Risoe.BINfileData

General accessor function for RLum S4 class objects

set_RLum

General set function for RLum S4 class objects

smooth_RLum

Smoothing of data

sTeve

sTeve - sophisticated tool for efficient data validation and evaluatio...

structure_RLum

General structure function for RLum S4 class objects

subset_SingleGrainData

Simple Subsetting of Single Grain Data from Risø BIN/BINX files

template_DRAC

Create a DRAC input data template (v1.2)

trim_RLum.Data

Trim Channels of RLum.Data-class Objects

tune_Data

Tune data for experimental purpose

use_DRAC

Use DRAC to calculate dose rate data

verify_SingleGrainData

Verify single grain data sets and check for invalid grains, i.e. zero-...

write_R2BIN

Export Risoe.BINfileData into Risø BIN/BINX-file

write_R2TIFF

Export RLum.Data.Image and RLum.Data.Spectrum objects to TIFF Images

write_RLum2CSV

Export RLum-objects to CSV

A collection of various R functions for the purpose of Luminescence dating data analysis. This includes, amongst others, data import, export, application of age models, curve deconvolution, sequence analysis and plotting of equivalent dose distributions.

  • Maintainer: Sebastian Kreutzer
  • License: GPL-3
  • Last published: 2024-09-12