MCMC Generalised Linear Mixed Models
Blue Tit Pedigree
Random Generation from a Truncated Normal Distribution
Incidence Matrix of Levels within a Factor
Incidence Matrix of Combined Levels within a Factor
Blue Tit Data for a Quantitative Genetic Experiment
Forms expected (co)variances for GLMMs fitted with MCMCglmm
Commutation Matrix
Density of a (conditional) multivariate normal variate
d-divergence
List of unevaluated expressions for (mixed) partial derivatives of fit...
Tensor of (mixed) partial derivatives
Evaluates a list of (mixed) partial derivatives
Prior Covariance Matrix for Fixed Effects.
Inverse Relatedness Matrix and Phylogenetic Covariance Matrix
(Mixed) Central Moments of a Multivariate Normal Distribution
Kronecker Product Permutation Matrix
Krzanowski's Comparison of Subspaces
Central Moments of a Uniform Distribution
Forms the direct sum from a list of matrices
Multivariate Generalised Linear Mixed Models
Multivariate Generalised Linear Mixed Models
Design Matrix for Measurement Error Model
Design Matrices for Multiple Membership Models
Design Matrix for Path Analyses
Probability that all multinomial categories have a non-zero count.
Phenoloxidase measures on caterpillars of the Indian meal moth.
Resistance of Indian meal moth caterpillars to the granulosis virus Pi...
Resistance (as a binary trait) of Indian meal moth caterpillars to the...
Plots MCMC chains from MCMCglmm using plot.mcmc
Plots covariance matrices
Posterior distribution of ante-dependence parameters
Transforms posterior distribution of covariances into correlations
Posterior distribution of eigenvalues
Posterior distribution of matrix inverse
Estimates the marginal parameter modes using kernel density estimation
Predict method for GLMMs fitted with MCMCglmm
Pedigree pruning
Tensor of Sample (Mixed) Central Moments
Random Generation of MVN Breeding Values and Phylogenetic Effects
Residuals form a GLMM fitted with MCMCglmm
Random Generation from the Conditional Inverse Wishart Distribution
Random Generation from a Truncated Conditional Normal Distribution
Simulate method for GLMMs fitted with MCMCglmm
Design Matrix for Simultaneous and Recursive Relationships between Res...
Converts sparseMatrix to asreml's giv format
Orthogonal Spline Design Matrix
Horn type and genders of Soay Sheep
Summarising GLMM Fits from MCMCglmm
Lower/Upper Triangle Elements of a Matrix
Fits Multivariate Generalised Linear Mixed Models (and related models) using Markov chain Monte Carlo techniques (Hadfield 2010 J. Stat. Soft.).