RiskMap1.0.0 package

Geostatistical Modeling of Spatially Referenced Data

assess_pp

Assess Predictive Performance via Spatial Cross-Validation

assess_sim

Assess Simulations

check_mcmc

Check MCMC Convergence for Spatial Random Effects

coef.RiskMap

Extract Parameter Estimates from a "RiskMap" Model Fit

compute_ID_coords

Compute Unique Coordinate Identifiers

convex_hull_sf

Convex Hull of an sf Object

create_grid

Create Grid of Points Within Shapefile

dast

Fitting of decay-adjusted spatio-temporal (DAST) model

dist_summaries

Summaries of the distances

glgpm_sim

Simulation from Generalized Linear Gaussian Process Models

glgpm

Estimation of Generalized Linear Gaussian Process Models

gp

Gaussian Process Model Specification

Laplace_sampling_MCMC

Laplace-sampling MCMC for Generalized Linear Gaussian Process Models

matern_cor

Matern Correlation Function

matern.grad.phi

First Derivative with Respect to ϕ\phi

matern.hessian.phi

Second Derivative with Respect to ϕ\phi

maxim.integrand

Maximization of the Integrand for Generalized Linear Gaussian Process ...

plot_AnPIT

Plot Calibration Curves (AnPIT / PIT) from Spatial Cross-Validation

plot_mda

Plot the estimated MDA impact function

plot_s_variogram

Plotting the empirical variogram

plot_score

Plot Spatial Scores for a Specific Model and Metric

plot_sim_surf

Plot simulated surface data for a given simulation

plot.RiskMap_pred_target_grid

Plot Method for RiskMap_pred_target_grid Objects

plot.RiskMap_pred_target_shp

Plot Method for RiskMap_pred_target_shp Objects

pred_over_grid

Prediction of the random effects components and covariates effects ove...

pred_target_grid

Predictive Target Over a Regular Spatial Grid

pred_target_shp

Predictive Targets over a Shapefile (grid-aggregated)

print.summary.RiskMap

Print Summary of RiskMap Model

print.summary.RiskMap.sim.res

Print Simulation Results

print.summary.RiskMap.spatial.cv

Print Summary of RiskMap Spatial Cross-Validation Scores

propose_utm

EPSG of the UTM Zone

re

Random Effect Model Specification

s_variogram

Empirical variogram

set_control_sim

Set Control Parameters for Simulation

summary.RiskMap

Summarize Model Fits

summary.RiskMap.sim.res

Summarize Simulation Results

summary.RiskMap.spatial.cv

Summarize Cross-Validation Scores for Spatial RiskMap Models

surf_sim

Simulate surface data based on a spatial model

to_table

Generate LaTeX Tables from RiskMap Model Fits and Validation

update_predictors

Update Predictors for a RiskMap Prediction Object

Geostatistical analysis of continuous and count data. Implements stationary Gaussian processes with Matérn correlation for spatial prediction, as described in Diggle and Giorgi (2019, ISBN: 978-1-138-06102-7).