SimSurvey0.1.6 package

Convert abundance-at-age matrix to abundance-at-length

Helper function to generate precision matrix Q for simulation

Calculate common error statistics

Set-up a series of surveys from all combinations of settings supplied

Generate Fibonacci sequence

Convert length to length group

Calculate intraclass correlation

Make a depth stratified survey grid

Make an R-INLA mesh based off a grid

Print object size

Simple plotting functions

Objects exported from other packages

Round simulated population

Run stratified analysis on simulated data

Simulate basic population dynamics model

Simulate age-year-space covariance

Simulate age-year-space covariance using SPDE approach

Simulate spatial and temporal distribution

Closure for simulating logistic curve

Define a non-linear relationship

Define a parabolic relationship

Simulate starting abundance, random recruitment and total mortality

Simulate survey sets

Simulate stratified-random survey

Simulate stratified random surveys using parallel computation

Closure for simulating length given age using von Bertalanffy notation

Prepare simulated data for stratified analysis

Calculate error of stratified estimates

Calculate stratified means, variances and confidence intervals across ...

Lite sample survey mesh and related items

Test sampling design of multiple surveys using a stratified analysis

Make a flexdashboard for visualizing the simulation