Computer Simulations of 'SNP' Data
Creates the reference table for running gl.sim.WF.run
Shiny app for the input of the reference table for the simulations
Shiny app for the input of the simulations variables
Setting up the package
Comparing simulations against theoretical expectations
Report allelic retention and simulate a rarefaction curve
Creates a dispersal file as input for the function gl.sim.WF.run
Simulates emigration between populations
Runs Wright-Fisher simulations
Simulate diploid genotypes from per-population allele frequencies
Simulates individuals based on allele frequencies
Simulates mutations within a genlight object
Simulate a population with constant mutation rate
Simulates offspring based on alleles provided by parents
Allows to simulate SNP data using genlight objects. For example, it is straight forward to simulate a simple drift scenario with exchange of individuals between two populations or create a new genlight object based on allele frequencies of an existing genlight object.
Useful links