Generalised Linear Mixed Models in R
Beta distribution declaration
Extracts fixed effect coefficients from a mcml object
Extracts coefficients from a Model object
Fixed effect confidence intervals for a mcml
object
R6 Class representing a covariance function and data
Generate crossed block structure
Generates all the orderings of a
Extracts the family from a mcml
object.
Extracts the family from a Model
object. This information can also b...
Fitted values from a mcml
object
Extract or generate fitted values from a Model
object
Extracts the fixed effect estimates
Extracts the formula from a mcml
object.
Extracts the formula from a Model
object
tools:::Rd_package_title("glmmrBase")
Automatic differentiation of formulae
Map lme4 formula to glmmrBase formula
Extracts the log-likelihood from an mcml object
Extracts the log-likelihood from an mcml object
Generate matrix mapping between data frames
lme4 style generlized linear mixed model
lme4 style linear mixed model
Returns the file name and type for MCNR function
R6 Class representing a mean function/linear predictor
A GLMM Model
Generates a block experimental structure using Nelder's formula
Generate nested block structure
Predict from a mcml
object
Generate predictions at new values from a Model
object
Prints an mcml fit output
Generates a progress bar
Family declaration to support quantile regression
Extracts the random effect estimates
Residuals method for a mcml
object
Extract residuals from a Model
object
Disable or enable parallelised computing
Summarises an mcml fit output
Summarizes a Model
object
Extract the Variance-Covariance matrix for a mcml
object
Calculate Variance-Covariance matrix for a Model
object
Specification, analysis, simulation, and fitting of generalised linear mixed models. Includes Markov Chain Monte Carlo Maximum likelihood and Laplace approximation model fitting for a range of models, non-linear fixed effect specifications, a wide range of flexible covariance functions that can be combined arbitrarily, robust and bias-corrected standard error estimation, power calculation, data simulation, and more. See <https://samuel-watson.github.io/glmmr-web/> for a detailed manual.
Useful links