glossa1.2.4 package

Enlarge/Buffer a Polygon

Clean Coordinates of Presence/Absence Data

Continuous Boyce Index (CBI) with weighting

Create Geographic Coordinate Layers

Cross-validation for BART model

Create a Download Action Button

Evaluation metrics for model predictions

Server Logic for Export Plot Functionality

Create UI for Export Plot Button

Extract Non-NA Covariate Values

Server-side Logic for Custom File Input

Custom File Input UI

Fit a BART Model Using Environmental Covariate Layers

Generate cross-validation folds

Generate Pseudo-Absences Using Buffer-Out Strategy

Generate Environmental-space Pseudo-Absences via flexsdm (per temporal...

Generate Random Pseudo-Absences

Generate Pseudo-Absences Using Target-Group Background

Generate Prediction Plot

Generate Pseudo-Absence Points Using Different Methods Based on Presen...

Get Covariate Names

Compute specificity and sensitivity

Main Analysis Function for GLOSSA Package

Export Glossa Model Results

Invert a Polygon

Apply Polygon Mask to Raster Layers

Misclassification Error

Compute the optimal probability cutoff score

Optimal Cutoff for Presence-Absence Prediction

Plot cross-validation fold assignments

Plot cross-validation metrics

Make Predictions Using a BART Model

Read and Validate Extent Polygon

Load Covariate Layers from ZIP Files

Read and validate presences/absences CSV file

Remove Duplicated Points from a Dataframe

Remove Points Inside or Outside a Polygon

Calculate Response Curve Using BART Model

Run GLOSSA Shiny App

Calculate the sensitivity for a given logit model

Create a Sparkline Value Box

Calculate the specificity for a given logit model

Validate Fit and Projection Layers

Validate Layers Zip

Validate Match Between Presence/Absence Files and Fit Layers

Variable Importance in BART Model

Calculate Youden's index