miceafter0.5.0 package

Data and Statistical Analyses after Multiple Imputation

bf_test

Calculates the Brown-Forsythe test.

check_model

Function to check input data for function glm_mi

cindex

Calculates the c-index and standard error

clean_P

Function to clean variables

cor_est

Calculates the correlation coefficient

cor2fz

Fisher z transformation of correlation coefficient

df2milist

Turns a data frame with multiply imputed data into an object of class ...

f2chi

Converts F-values into Chi Square values

fz2cor

Fisher z back transformation of correlation coefficient

glm_lm_bw

Backward selection of Linear regression models across multiply imputed...

glm_lm_fw

Forward selection of Linear regression models across multiply imputed ...

glm_lr_bw

Backward selection of Logistic regression models in multiply imputed d...

glm_lr_fw

Forward selection of Logistic regression models in multiply imputed da...

glm_mi

Direct Pooling and model selection of Linear and Logistic regression m...

invlogit

Takes the inverse of a logit transformed value

invlogit_ci

Takes the inverse of logit transformed parameters and calculates the c...

levene_test

Calculates the Levene's test

list2milist

Turns a list object with multiply imputed datasets into an object of c...

logit_trans

Logit transformation of parameter estimates

mids2milist

Turns a 'mice::mids' object into an object of class 'milist' to be fur...

odds_ratio

Calculates the odds ratio (OR) and standard error.

pool_bftest

Calculates the pooled Brown-Forsythe test.

pool_cindex

Calculates the pooled C-index and Confidence intervals

pool_cor

Calculates the pooled correlation coefficient and Confidence intervals

pool_D2

Combines the Chi Square statistics across Multiply Imputed datasets

pool_D4

Pools the Likelihood Ratio tests across Multiply Imputed datasets ( me...

pool_glm

Pools and selects Linear and Logistic regression models across multipl...

pool_levenetest

Calculates the pooled Levene test.

pool_odds_ratio

Calculates the pooled odds ratio (OR) and related confidence interval.

pool_prop_nna

Calculates the pooled proportion and confidence intervals using an app...

pool_prop_wald

Calculates the pooled proportion and standard error according to Wald ...

pool_prop_wilson

Calculates the pooled single proportion confidence intervals according...

pool_propdiff_ac

Calculates the pooled difference between proportions and standard erro...

pool_propdiff_nw

Calculates the pooled difference between proportions and confidence in...

pool_propdiff_wald

Calculates the pooled difference between proportions and standard erro...

pool_risk_ratio

Calculates the pooled risk ratio (RR) and related confidence interval.

pool_scalar_RR

Rubin's Rules for scalar estimates

pool_t_test

Calculates the pooled t-test and Confidence intervals

prop_nna

Calculates the posterior beta components for a single proportion

prop_wald

Calculates a single proportion and related standard error according to...

propdiff_ac

Calculates the difference between proportions and standard error accor...

propdiff_wald

Calculates the difference between proportions and standard error accor...

risk_ratio

Calculates the risk ratio (RR) and standard error.

t_test

Calculates the one, two and paired sample t-test

with.milist

Evaluate an Expression across a list of multiply imputed datasets

Statistical Analyses and Pooling after Multiple Imputation. A large variety of repeated statistical analysis can be performed and finally pooled. Statistical analysis that are available are, among others, Levene's test, Odds and Risk Ratios, One sample proportions, difference between proportions and linear and logistic regression models. Functions can also be used in combination with the Pipe operator. More and more statistical analyses and pooling functions will be added over time. Heymans (2007) <doi:10.1186/1471-2288-7-33>. Eekhout (2017) <doi:10.1186/s12874-017-0404-7>. Wiel (2009) <doi:10.1093/biostatistics/kxp011>. Marshall (2009) <doi:10.1186/1471-2288-9-57>. Sidi (2021) <doi:10.1080/00031305.2021.1898468>. Lott (2018) <doi:10.1080/00031305.2018.1473796>. Grund (2021) <doi:10.31234/osf.io/d459g>.

  • Maintainer: Martijn Heymans
  • License: GPL (>= 2)
  • Last published: 2022-10-02