normfluodbf2.0.0 package

Cleans and Normalizes FLUOstar DBF and DAT Files from 'Liposome' Flux Assays

add_package_namespace

Add Package Namespace

analyze

Analyze

average_fluorescence_by_row_cycle

Capitalize

Cache

Cache

capitalize

Capitalize

check_broken_packages

Check Broken Packages

check_dirt

Check Dirt

check_package_usage

Check package or function Usage

childtype

Child Type

clean_commas

DAT file data frame cleaner.

cleandats

DAT file wrangler.

comma_cleaner

Comma Cleaner function.

comment_out_lines

Comment Out

dat_col_names_horizontal

Attribute(s) naming function.

dat_col_names_optimus

Attribute(s) naming function.

dat_col_names_prime

Attribute(s) naming function.

dat_col_names_rigid

Attribute(s) naming function.

defineparams

Define Plate Parameters

definestatus

Define Plate Status

definesteps

Define Plate Steps

demo

Run the shiny App In addition to the functions provided in this packag...

detectoutliers

Detect Outliers

dirutils

Directory Utils

fluorthresholdcheck

A fluorescence quantification Quality Control (QC) function.

formatplatedata

Format Plate Data

get_wells_used

Wells Used

getfilename

Get File Name(s)

globalcache

Globals Cache

grapes-there-grapes

The %there% operator

internals

Internal Troubleshoot

isnormalized

Is Normalized

launch

Run the shiny App checking dependencies in R code ... WARNING In addit...

liposome_fluor_dbfs

Cleans and Normalizes DBF files obtained from experiments using the FL...

loadplatedata

Load Plate Data

loadplatemeta

Load Plate Meta

modifyplatedata

Modify Plate Data

move_file

Move File

multiplot

Multiplot

normalize_liposome_fluor_dats

Cleans and normalizes DAT files obtained from experiments using the FL...

normalize

Normalize

normalizebywell

Normalize by Well

normalizingagents

Normalizing Agents

normfluodbf_utils

A function to append a unique identifier attribute to any data frame w...

normfluodbf-package

normfluodbf: Cleans and Normalizes FLUOstar DBF and DAT Files from 'Li...

normfluodbfcomms

Directory Utils

normfluodbfplots

Plot Plate - Favorite is Fluostar style

parenttype

Parent Type

plate_data_summary

Plate Data Summary

plate_types

Plate Types Tibble

plate

Plate

platedata

Plate Data

platemeta

Plate Meta

platename

Plate Name

plotutils

Adeckstats Plots

printer

Print

quiet

Quiet

remove_leading_zero

Format Well Names

removeoutliers

Outliers

replace_word_in_file

Replace Word

resample

A function to create an attribute or column for each sample loaded int...

resamplescale

A function to create an attribute or column for each sample loaded int...

sampledata

Get Development Data

saveloadutils

Save and Load Plate

set_assiette_type

Set The Plate Types

set_plate_type

Set The Child Plate Type

set_plate_version

Plate Version

setparams

Set Plate Params

setsteps

Set Plate Steps

source_files

Title: Source files

status

Status

stepspipeline

Steps Pipeline

stepsutils

Steps Utils

subset

Subset

subsetutils

Subset Utils

testthatutils

Test Boilerplate

type

Plate Type

uploadplatedata

Upload Plate Data

xycoordinates

Plot Coordinates

Cleans and Normalizes FLUOstar DBF and DAT Files obtained from liposome flux assays. Users should verify extended usage of the package on files from other assay types.

  • Maintainer: Tingwei Adeck
  • License: MIT + file LICENSE
  • Last published: 2024-09-27