relSim1.0.0 package

Relative Simulator

allPairsLR

Compute the likehood ratio for all pairs of profiles in a database

blockSim

Perform relatives simulations using large memory blocks in C

breedFst

Breed a population with an approximate level of thetatheta(FstFst)

calcFst

Caculate locus-wise and population FstFst values

calcFStats

Calculate locus-wise and population theta=FSTtheta = F_ST, F=FITF = F_IT, and $f...

checkFreqs

Make sure that the frequencies are such

errorRate

Returns the false positive or false negative rates for a set of IBS an...

exclusionPower

Calculate the exclusion power of a multiplex by locus

famSearch

Search a database for siblings or children

fetchBMdata

Retrieve data from Budowle and Moretti (1999) from the web

IBS

Identity by state

IS

Use importance sampling to determine the probability of m peaks from n...

locusIBS

Identity by state at a locus

lrMix

Calculate locuswise likelihood ratios for two person victim/suspect mi...

lrPC

Likelihood Ratio for Parent-Child / Paternity Index

lrSib

Likelihood Ratio / Kinship Index for full-siblings

lrSibDebug

Likelihood Ratio / Kinship Index for full-siblings

normalizeFreqs

Normalize frequencies to 1

print.population

Print summary details of a substructed population

print.profile

Print a DNA profile

randomChild

Generate a random child from a given DNA profile and a given set of al...

randomPCPairs

Generate one or more random parent/child pairs from a given set of all...

randomProfile

Generate a random DNA profile from a given set of allele frequencies

randomProfilePairs

Generate one or more random DNA profile pairs from a given set of alle...

randomSample

Generate a random sample of related (or unrelated) pairs of people

randomSib

Generate a random sibling from a given DNA profile and a given set of ...

randomSibPairs

Generate one or more pairs of random siblings from a given set of alle...

readFreqs

Read in a file of allele frequencies

readProfiles

Read a set of profiles from a file

readResults

Read a simulation result set from file

relSim-package

relSim: Relative Simulator

sim

Perform the relatives simulation

simNpersonMixture

Simulate and count unique alleles in N person mixtures

toNexus

Export a population with substructure to a Nexus file

writeCSV

Saves/writes population frequencies to disk

writePop

Saves/writes population profiles to disk

A set of tools to explore the behaviour statistics used for forensic DNA interpretation when close relatives are involved. The package also offers some useful tools for exploring other forensic DNA situations.

  • Maintainer: James M. Curran
  • License: GPL (>= 2)
  • Last published: 2023-12-04