An Implementation of the TSIR Model
corr
derivative
epitimes
estpars
jagsfilter
logcorr
maxthreshold
mcmcestpars
mcmctsir
plotbeta
plotbreaks
plotcases
plotcomp
plotdata
plotforward
plotLLE
plotregression
plotres
plotrho
plotsbar
predicttsir
residuals.births
residuals.cases
runtsir
simulatetsir
TSIR_LE
TSIR_LLE
tsiRdata
vplayout
An implementation of the time-series Susceptible-Infected-Recovered (TSIR) model using a number of different fitting options for infectious disease time series data. The manuscript based on this package can be found here <doi:10.1371/journal.pone.0185528>. The method implemented here is described by Finkenstadt and Grenfell (2000) <doi:10.1111/1467-9876.00187>.