Easy Visualization of ABH Genotypes
ABHgenotypeR: A package for easy visualization and manipulating of ABH...
Correct short miscalled stretches based on flanking alleles.
Correct undercalled heterozygous sites based on flanking alleles.
Impute missing genotypes based on flanking alleles
Plot the parental allele frequencies along the chromosomes.
Compare to genotype matrices
Plot graphical genotypes.
Plot the marker density along the chromosomes.
Read in the output of the genosToABH plugin.
Report the total and relative number of each allele in a genotype obje...
Export a genotype list to a .csv file.
Easy to use functions to visualize marker data from biparental populations. Useful for both analyzing and presenting genotypes in the ABH format.
Useful links