Visualization and Post-Processing of 'RevBayes' Analyses
Bayes Factors in support of a shift in diversification rates over a gi...
Color Function
Combine traces
DensiTree-style plot with branch-specific data
dropTip
plot geom stepribbon for diversification rates
get MAP
match Nodes
plot Ancestral States MAP
plot Ancestral States Pie
Plot Diversity Distribution from OBDP Analysis
Plot Diversification Rates
Plot FBD tree
plotHiSSE
Plot Mass Extinction Support
plotMuSSE
Plot Population Sizes
plot Posterior Predictive Statistics
Plot trace
Plot tree
Plot Full tree
Priors from MCMC samples
Process Ancestral States
processBranchData
Process Diversification Rates
Process Population Sizes
process Posterior Predictive Statistics
Title
Read OBDP Outputs
Read trace
Read trees
Remove Burnin
Reroot Phylo
RevGadgets
Sets a global scale parameter for a GMRF or HSMRF model given a prior ...
Simulates a single Markov random field trajectory.
Summarize trace
Processes and visualizes the output of complex phylogenetic analyses from the 'RevBayes' phylogenetic graphical modeling software.
Useful links