portalr0.4.5 package

Create Useful Summaries of the Portal Data

na_conformer

Conform NA entries to "NA" entries

ndvi

NDVI by calendar month or lunar month

phenocam

Phenocam data products by day, calendar month, or lunar month

pipe

Pipe operator

load_rodent_data

Read in the Portal data files

add_seasons

Add Seasons

bait_presence_absence

Ant Bait Presence Absence

check_for_newer_data

Check for latest version of data files

clean_plant_data

Do basic cleaning of Portal plant data

clean_rodent_data

Do basic cleaning of Portal rodent data

summarize_rodent_data

Generate summaries of Portal rodent data

colony_presence_absence

Ant Colony Presence Absence

download_observations

Download the PortalData repo

fcast_ndvi

Forecast ndvi using a seasonal auto ARIMA

fill_missing_ndvi

Fill in historic ndvi data to the complete timeseries being fit

find_incomplete_censuses

Period code for incomplete censuses

get_dataset_citation

Return Citation for Portal Data

get_future_newmoons

Get future newmoon dates and numbers

load_datafile

read in a raw datafile from the downloaded data or the GitHub repo

portalr

Creates summaries of the Portal data

print

Prints a portal_data_list object

return_if_null

If a Value is NULL, Trigger the Parent Function's Return

rodent_species

Rodent species abbreviations

shrub_cover

Generate percent cover from Portal plant transect data

summarize_individual_rodents

Return cleaned Portal rodent individual data

summarize_plant_data

Generate summaries of Portal plant data

use_default_data_path

Manage the default path for downloading Portal Data into

weather

Weather by day, calendar month, or lunar month

Download and generate summaries for the rodent, plant, ant, and weather data from the Portal Project. Portal is a long-term (and ongoing) experimental monitoring site in the Chihuahuan desert. The raw data files can be found at <https://github.com/weecology/portaldata>.

  • Maintainer: Glenda M. Yenni
  • License: MIT + file LICENSE
  • Last published: 2026-01-28