Functions for the Book "Applied Statistical Modeling for Ecologists"
Fit a Poisson GLM with MCMC
Print Estimates, Standard Errors, and 95% Wald-type Confidence Interva...
Summarize MCMC Samples in an mcmc.list Object Created by NIMBLE
Simulate data for Chapter 12.4: Counts with offsets
Simulate data for Chapter 10.2: Linear mixed-effects model
Simulate data for Chapter 10.5: Linear mixed-effects model with correl...
Simulate data for Chapter 11: Comparing two groups of Poisson counts
Simulate data for Chapter 12.2: Overdispersed counts
Simulate data for Chapter 12.3: Zero-inflated counts
Simulate data for Chapter 13: Poisson ANCOVA
Simulate data for Chapter 14: Poisson GLMM
Simulate data for Chapter 15: Comparing two groups of binomial counts
Simulate data for Chapter 16: Binomial ANCOVA
Simulate data for Chapter 17: Binomial GLMM
Simulate data for Chapter 18: model selection
Simulate data for Chapter 19: Occupancy model
Simulate data for Chapter 19B: Binomial N-mixture Model
Simulate data for Chapter 20: Integrated model
Simulate data for Chapter 4: Model of the mean
Simulate data for Chapter 5: Simple linear regression
Simulate data for Chapter 6.2: Two groups with equal variance
Simulate data for Chapter 6.3: Two groups with unequal variance
Simulate data for Chapter 7.2: ANOVA with fixed effects of population
Simulate data for Chapter 7.3: ANOVA with random effects of population
Simulate data for Chapter 8: Two-way ANOVA
Simulate data for Chapter 9: ANCOVA or general linear model
Summarize Output from TMB
Provides functions to accompany the book "Applied Statistical Modeling for Ecologists" by Marc Kéry and Kenneth F. Kellner (2024, ISBN: 9780443137150). Included are functions for simulating and customizing the datasets used for the example models in each chapter, summarizing output from model fitting engines, and running custom Markov Chain Monte Carlo.
Useful links