Tools for Working with Connectivity Data
Compute vector of beta values
Beverton-Holt settler-recruit relationship
Tools for working with connectivity matrices
Returns probability density function (PDF) for a mix of marked and unm...
Estimate the probability distribution of relative connectivity values ...
Functions for estimating the probability distribution for relative con...
Estimate the probability distribution for the number of settlers origi...
Calculates unnormalized probability density for relative connectivity ...
Functions for estimating the probability distribution of relative conn...
Estimate the probability distribution of relative connectivity values ...
Population dynamics model based on lifetime-egg-production
Extended DPR population dynamics model to include homerange movement
Fraction of eggs marked for male and female mark transmission
Compute some eigenvalues of a matrix
Gamma distribution shape and scale parameters from mean and standard d...
Hockey-stick settler-recruit relationship
Uniform Laplacian connectivity matrix
Local retention of a connectivity matrix
Merge subpopulations
Maximum-likelihood estimate for relative connectivity given two distri...
Iteratively, optimally split a connectivity matrix
Returns probability a set of observations correspond to marked individ...
Function to select optimal network of protected areas based on connect...
Quality measure for subpopulation division
Estimates of fraction of eggs marked accounting for variability in rep...
Recursively subdivides a set of subpoplations
Reduced connectivity matrix according to a set of subpopulations
Relative local retention of a connectivity matrix
Self recruitment of a connectivity matrix
Correction for slope of settler-recruit relationship
Split connectivity matrix into subpopulations
Create a probability density step function from a histogram object
Convert subpopulation vector to a list of indices
Collects several different methods for analyzing and working with connectivity data in R. Though primarily oriented towards marine larval dispersal, many of the methods are general and useful for terrestrial systems as well.