Automated and Early Detection of Seasonal Epidemic Onset
Antimicrobial Resistance Data Analysis
Accurate Estimation of Influenza Epidemics using Google Search Data
The BETS Model for Early Epidemic Data
Bayesian Kernel Machine Regression
Analysis of Coarsely Observed Data
Dengue Cases and Climate Variables in Colombo Sri Lanka
Coronavirus ('Rona') Data Exploration
R Interface to COVID-19 Data Hub
The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset
The Covid19 San Francisco Dataset
Solvers for Initial Value Problems of Differential Equations ('ODE', '...
Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology...
Estimation of Transmissibility in the Early Stages of a Disease Outbre...
Simulate and Evaluate Time Series for Environmental Epidemiology
Transmissions and Receptions in an End to End Network
Elementary Epidemiological Functions for Epidemiology and Biostatistic...
Ewnet: An Ensemble Wavelet Neural Network for Forecasting and Epicasti...
A Tidy Solution for Epidemiological Data
Handling, Visualisation and Analysis of Epidemiological Contacts
Plot an Epidemic Curve
Epidemiological Data Display Package
UK Epidemiological Data Management
Dynamic Models in Epidemiology
Estimate Time Varying Reproduction Numbers from Epidemic Curves
Predicting Disease Spread from Flow Data
Code Sharing at the Department of Epidemiological Research at Statens ...
Spatial and Network Based Individual Level Models for Epidemics
Continuous Time Distance-Based and Network-Based Individual Level Mode...
Variational Techniques in Epidemiology
Functions and Data for "Epidemics: Models and Data in R"
Functions and Data for "Epidemics: Models and Data in R (2nd Edition)"
Epidemic/Network-Related Tools
Epidemiological Report
Signal Detection Analysis
Tools for Epidemiologists
Flexible Contingency Tables for Epidemiology
Epidemiology Tools
Small Helpers and Tricks for Epidemics Analysis
Early Detection of Public Health Threats from 'Twitter' Data
Empirical Transition Matrix
Bayesian Parameter Estimation and Forecasting for Epidemiological Mode...
Predict Epidemic Curves with Generalized SEIR Modeling
Process Based Epidemiological Model for Cercospora Leaf Spot of Sugar ...
Incidence Estimation Tools
Reconstruction of Transmission Chains from Surveillance Data
Causal Mediation Analysis
Combined Visualisation of Phylogenetic and Epidemiological Data
Statistical Inference for Partially Observed Markov Processes
Multiple Mediation Analysis
Modelling Infectious Disease Superspreading from Contact Tracing Data
Nondetects and Data Analysis for Environmental Data
Naive Bayes Transmission Analysis
A Forward Agent-Based Transmission Chain Simulator
Data Quality in Epidemiological Research
Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologi...
A Collection of Disease Outbreak Data
Power and Sample Size Calculation for Survival Analysis of Epidemiolog...
Methods and Data for Spatial Epidemiology
Social Mixing Matrices for Infectious Disease Modelling
NHANES Data Retrieval
Estimation of R0 and Real-Time Reproduction Number from Epidemics
Statistical Analysis in Epidemiology
Evaluate Trending Models
Model Temporal Trends
G-Computation to Estimate Interpretable Epidemiological Effects
Inference of Transmission Tree from a Dated Phylogeny
An Implementation of the TSIR Model
Interactive Plotting for Mathematical Models of Infectious Disease Spr...
Design and Analysis of Disease Surveillance Activities
Calculate the Final Size of an Epidemic
Miscellaneous Helper Tools for Epidemiologists
Epidemic Volatility Index as an Early-Warning Tool
Brazilian COVID-19 Pandemic Data
High-Dimensional Mediation Analysis
Interface to 'episensr' for Sensitivity Analysis of Epidemiological Re...
Basic Sensitivity Analysis of Epidemiological Results
A Tidy Format Datasets of Dengue by Country
Amend, Augment and Aid Analysis of John Snow's Cholera Map
Cases of COVID-19 in the United States
COVID-19 Cases in Switzerland and Principality of Liechtenstein
Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019)
Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in R For...
Cases of COVID-19 in France
Drugs Databases Parser
Tidy Epidemiological Rates
Load and Analyze Live Data from the COVID-19 Pandemic
The Moving Epidemic Method
The Moving Epidemic Method Web Application
The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset
Solve Delay Differential Equations
Excess Mortality
Client for Delphi's 'Epidata' API
Tagging and Validating Epidemiological Data
Estimate Disease Severity and Case Ascertainment
A 'shiny' Wrapper of the R Package 'epiworldR'
Social Contact Matrices for 177 Countries
Compute, Handle, Plot and Model Incidence of Dated Events
Subdistribution Analysis of Competing Risks
Classes and Helper Functions for Working with Epidemiological Paramete...
Functions for Epidemiological Analysis using Population Data
Bayesian Analysis of Epidemic Data Using Line List and Case Count Appr...
A Framework for Data-Driven Stochastic Disease Spread Simulations
Understand Individual-Level Variation in Infectious Disease Transmissi...
Fast Agent-Based Epi Models
Statistical and Viz Tools for Vector-Borne Diseases in Colombia
Tools for the Analysis of Epidemiological Data
Epidemiological Tool for Contact Tracing
Data Preparation, Estimation and Prediction in Multi-State Models
Plausibility Analysis of Epidemiological Signals
An R Interface to Open-Access Malaria Data, Hosted by the 'Malaria Atl...
Estimate Real-Time Case Counts and Time-Varying Epidemiological Parame...
Mathematical Modeling of Infectious Disease Dynamics
Alert Time Quality - Evaluating Timely Epidemic Metrics
Simulating and Analysing Transmission Chain Statistics Using Branching...
Exploratory Analysis of Genetic and Genomic Data
ODE Generation and Integration
Compute, Handle and Plot Incidence of Dated Events
Package for Environmental Statistics, Including US EPA Guidance
Nonlinear Mixed Effects Models of Epidemic Growth
Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Pheno...
Health Metrics and the Spread of Infectious Diseases
Bayesian Inference and Model Selection for Stochastic Epidemics
Tools for Outbreak Investigation/Infectious Disease Surveillance
Database of Epidemiological Parameters
Estimate Vaccine Effectiveness Based on Different Study Designs
Data Wrangling and Automated Reports from 'SIVIGILA' Source
Clean and Standardize Epidemiological Data